Transcript: LINC00930:5

Basic information

LNCipedia transcript ID: LINC00930:5 
HGNC Gene Symbol: LINC00930    
HGNC Full Gene Name: long intergenic non-protein coding RNA 930
Ensembl Gene ID: ENSG00000258647
Ensembl Transcript ID: ENST00000554542
Location (hg38): chr15:92568190-92570812
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 428 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554542; ENST00000554542.1; RP11-304N14.2-001; OTTHUMT00000414929.1; NONHSAT048529
Alternative gene names: ENSG00000258647; RP11-304N14.2; ENSG00000258647.1; OTTHUMG00000171742.1; LINC00930; ENSG00000258647.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -263.6744 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00930:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM174B-2:4
3.1 lnc-FAM174B-2:4
4.0 LINC00930:5
4.1 LINC00930:5
5.0 LINC00930:5
5.1 LINC00930:5
5.2 LINC00930:5