Transcript: LINC00958:3

Basic information

LNCipedia transcript ID: LINC00958:3 
LNCipedia gene ID: LINC00958
RefSeq ID: NR_038904
Location (hg38): chr11:12979534-12989548
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1559 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT018085; NR_038904; NR_038904.1
Alternative gene names: ; LINC00958


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.2083 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00958:3 no no no no

Available literature

  1. Guo (2018), Long Noncoding RNA LINC00958 Accelerates Gliomagenesis Through Regulating miR-203/CDK2., DNA Cell Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BTBD10-3:12
4.0 LINC00958:3
4.1 LINC00958:3
5.0 LINC00958:3
5.1 LINC00958:3
5.2 LINC00958:3