Transcript: LINC00958:5

Basic information

LNCipedia transcript ID: LINC00958:5 
HGNC Gene Symbol: LINC00958    
HGNC Full Gene Name: long intergenic non-protein coding RNA 958
Ensembl Gene ID: ENSG00000251381
Ensembl Transcript ID: ENST00000527945
Location (hg38): chr11:12961842-12989547
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1121 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000527945.2
Alternative gene names: ENSG00000251381.7; LINC00958;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.5841 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00958:5 no no no no

Available literature

  1. Guo (2018), Long Noncoding RNA LINC00958 Accelerates Gliomagenesis Through Regulating miR-203/CDK2., DNA Cell Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00958:5
4.1 LINC00958:5
5.0 LINC00958:5
5.1 LINC00958:5
5.2 LINC00958:5