Transcript: LINC00987:3

Basic information

LNCipedia transcript ID: LINC00987:3 
LNCipedia gene ID: LINC00987
RefSeq ID: NR_036466
Location (hg38): chr12:9240003-9243049
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2469 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT026394; NR_036466; NR_036466.1
Alternative gene names: ; LINC00987


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.6891 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00987:3 no no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLRG1-2:3
4.0 LINC00987:3
4.1 LINC00987:3
5.0 LINC00987:3
5.1 LINC00987:3
5.2 LINC00987:3