Transcript: LINC00996:2

Basic information

LNCipedia transcript ID: LINC00996:2 
LNCipedia gene ID: LINC00996
Location (hg38): chr7:150433654-150448140
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1853 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012895; NONHSAT124135
Alternative gene names: XLOC_006293; linc-GIMAP8-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.1911 non-coding 
CPAT coding probability 1.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00996:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GIMAP8-1:2
3.1 lnc-GIMAP8-1:1
4.0 LINC00996:2
4.1 LINC00996:2
5.0 LINC00996:2
5.1 LINC00996:2
5.2 LINC00996:2

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