Transcript: LINC01197:3

Basic information

LNCipedia transcript ID: LINC01197:3 
LNCipedia gene ID: LINC01197
Location (hg38): chr15:95288143-95327256
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 784 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023811; NONHSAT050196
Alternative gene names: XLOC_011592; linc-RGMA-7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.4624 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01197:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC016251.1-4:3
3.1 lnc-AC016251.1-8:3
4.0 LINC01197:3
4.1 LINC01197:3
5.0 LINC01197:3
5.1 LINC01197:3
5.2 LINC01197:3