Transcript: LINC01197:6

Basic information

LNCipedia transcript ID: LINC01197:6 
LNCipedia gene ID: LINC01197
Location (hg38): chr15:95279292-95327100
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1376 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Broad Institute
Alternative transcript names: ENST00000508732; TCONS_00023208
Alternative gene names: ENSG00000248441; XLOC_011592; linc-RGMA-7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.4624 non-coding 
CPAT coding probability 10.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01197:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC016251.1-4:6
3.1 lnc-AC016251.1-8:6
4.0 LINC01197:6
4.1 LINC01197:6
5.0 LINC01197:6
5.1 LINC01197:6
5.2 LINC01197:6