Transcript: LINC01278:19

Basic information

LNCipedia transcript ID: LINC01278:19 
LNCipedia gene ID: LINC01278
Location (hg38): chrX:63426568-63560993
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 892 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016949; NONHSAT137308
Alternative gene names: XLOC_008174; linc-SPIN4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -14.2893 non-coding 
CPAT coding probability 27.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01278:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGEF9-1:8
3.1 lnc-ARHGEF9-1:8
4.0 LINC01278:19
4.1 LINC01278:19
5.0 LINC01278:19
5.1 LINC01278:19
5.2 LINC01278:19