Transcript: LINC01278:3

Basic information

LNCipedia transcript ID: LINC01278:3 
LNCipedia gene ID: LINC01278
Location (hg38): chrX:63399781-63561084
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 504 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017326; NONHSAT137302
Alternative gene names: XLOC_008174; linc-SPIN4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 7.2348 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01278:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGEF9-1:3
3.1 lnc-ARHGEF9-1:3
4.0 LINC01278:3
4.1 LINC01278:3
5.0 LINC01278:3
5.1 LINC01278:3
5.2 LINC01278:3