Transcript: LINC01287:5

Basic information

LNCipedia transcript ID: LINC01287:5 
LNCipedia gene ID: LINC01287
RefSeq ID: NR_125776
Location (hg38): chr7:153399919-153412234
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1008 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125776; NR_125776.1
Alternative gene names: TCONS_l2_00027522; LINC01287


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 33.5388 non-coding 
CPAT coding probability 21.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01287:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XRCC2-1:5
4.0 LINC01287:5
4.1 LINC01287:5
5.0 LINC01287:5
5.1 LINC01287:5
5.2 LINC01287:5