Transcript: LINC01304:11

Basic information

LNCipedia transcript ID: LINC01304:11 
HGNC Gene Symbol: LINC01304    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1304
Ensembl Gene ID: ENSG00000237401
Ensembl Transcript ID: ENST00000425949
Location (hg38): chr2:3959651-3974019
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1475 bp
Exons: 5
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00003162; ENST00000425949; ENST00000425949.1; AC107070.1-001; OTTHUMT00000322858.1; NONHSAT068773; ENST00000425949.5
Alternative gene names: XLOC_001954; linc-RNASEH1-7; ENSG00000237401; AC107070.1; ENSG00000237401.1; OTTHUMG00000151486.1; ENSG00000237401.2; ENSG00000237401.6; LINC01304;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.0144 non-coding 
CPAT coding probability 18.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01304:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNASEH1-2:7
3.1 lnc-RNASEH1-4:7
4.0 LINC01304:11
4.1 LINC01304:11
5.0 LINC01304:11
5.1 LINC01304:11
5.2 LINC01304:11