Transcript: LINC01320:20

Basic information

LNCipedia transcript ID: LINC01320:20 
HGNC Gene Symbol: LINC01320    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1320
Ensembl Gene ID: ENSG00000228262
Ensembl Transcript ID: ENST00000603129
Location (hg38): chr2:34713590-34737577
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 847 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT070047; ENST00000603129.1; ENST00000603129.5
Alternative gene names: ENSG00000228262.4; AC073218.2; ENSG00000228262.8; LINC01320;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.0117 non-coding 
CPAT coding probability 6.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01320:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASGRP3-4:9
4.0 LINC01320:20
4.1 LINC01320:20
5.0 LINC01320:20
5.1 LINC01320:20
5.2 LINC01320:20