Transcript: LINC01372:6

Basic information

LNCipedia transcript ID: LINC01372:6 
HGNC Gene Symbol: LINC01372    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1372
Ensembl Gene ID: ENSG00000235475
Ensembl Transcript ID: ENST00000430244
RefSeq ID: NR_108104
Location (hg38): chr7:67335976-67340024
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 489 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000430244; ENST00000430244.1; RP11-166O4.5-001; OTTHUMT00000346633.1; NONHSAT121282; NR_108104.1
Alternative gene names: ENSG00000235475; RP11-166O4.5; ENSG00000235475.1; OTTHUMG00000156924.1; LINC01372;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -181.5127 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01372:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STAG3L4-1:4
3.1 lnc-STAG3L4-1:4
4.0 LINC01372:6
4.1 LINC01372:6
5.0 LINC01372:6
5.1 LINC01372:6
5.2 LINC01372:6