Transcript: LINC01455:1

Basic information

LNCipedia transcript ID: LINC01455:1 
HGNC Gene Symbol: LINC01455    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1455
Ensembl Gene ID: ENSG00000250888
Ensembl Transcript ID: ENST00000503167
RefSeq ID: NR_131226
Location (hg38): chr5:79936579-79967626
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 561 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00009433; ENST00000503167.1; RP11-168A11.1-001; OTTHUMT00000369499.1; NONHSAT102378; NR_131226.1
Alternative gene names: XLOC_004442; linc-THBS4-1; ENSG00000250888.1; RP11-168A11.1; OTTHUMG00000162549.1; LINC01455; TCONS_00009433


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.0308 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01455:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-THBS4-2:1
3.1 lnc-THBS4-2:1
4.0 LINC01455:1
4.1 LINC01455:1
5.0 LINC01455:1
5.1 LINC01455:1
5.2 LINC01455:1