Transcript: LINC01526:1

Basic information

LNCipedia transcript ID: LINC01526:1 
LNCipedia gene ID: LINC01526
Location (hg38): chr6:81813288-81814192
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 553 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00011224
Alternative gene names: XLOC_005773; linc-FAM46A-1; Lnc-FAM46A-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.8975 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01526:1 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM46A-1:1
3.1 lnc-FAM46A-1:1
4.0 LINC01526:1
4.1 LINC01526:1
5.0 LINC01526:1
5.1 LINC01526:1
5.2 LINC01526:1