Transcript: LINC01590:3

Basic information

LNCipedia transcript ID: LINC01590:3 
HGNC Gene Symbol: LINC01590    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1590
RefSeq ID: NR_026784
Location (hg38): chr6:87397124-87399741
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1558 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026784; NR_026784.1
Alternative gene names: dJ102H19.4; LINC01590


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.6317 non-coding 
CPAT coding probability 26.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01590:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf164-1:3
4.0 LINC01590:3
4.1 LINC01590:3
5.0 LINC01590:3
5.1 LINC01590:3
5.2 LINC01590:3