Transcript: LRRC2-AS1:2

Basic information

LNCipedia transcript ID: LRRC2-AS1:2 
LNCipedia gene ID: LRRC2-AS1
Ensembl Gene ID: ENSG00000268324
Ensembl Transcript ID: ENST00000599511
Location (hg38): chr3:46557398-46559688
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2291 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000599511.1
Alternative gene names: ENSG00000268324.2; LRRC2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.3487 non-coding 
CPAT coding probability 62.61% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LRRC2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LRRC2-AS1:2
4.1 LRRC2-AS1:2
5.0 LRRC2-AS1:2
5.1 LRRC2-AS1:2
5.2 LRRC2-AS1:2