Transcript: MIR3663HG:10

Basic information

LNCipedia transcript ID: MIR3663HG:10 
LNCipedia gene ID: MIR3663HG
Location (hg38): chr10:117136284-117159037
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1245 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_383_chr10:118895794-118918543_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.7661 non-coding 
CPAT coding probability 2.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3663HG:10 no no no no

Available literature

  1. Ma (2015), Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes., Nat. Methods


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VAX1-1:9
4.0 MIR3663HG:10
4.1 MIR3663HG:10
5.0 MIR3663HG:10
5.1 MIR3663HG:10
5.2 MIR3663HG:10