Transcript: MIR4500HG:1

Basic information

LNCipedia transcript ID: MIR4500HG:1 
LNCipedia gene ID: MIR4500HG
Location (hg38): chr13:87615284-87671273
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 910 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022080; NONHSAT034592
Alternative gene names: XLOC_010683; linc-SLITRK6-6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -164.727 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4500HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLITRK6-9:1
3.1 lnc-SLITRK6-9:1
4.0 MIR4500HG:1
4.1 MIR4500HG:1
5.0 MIR4500HG:1
5.1 MIR4500HG:1
5.2 MIR4500HG:1