Transcript: NRG1-IT3:1

Basic information

LNCipedia transcript ID: NRG1-IT3:1 
HGNC Gene Symbol: NRG1-IT3    
HGNC Full Gene Name: NRG1 intronic transcript 3
Ensembl Gene ID: ENSG00000254049
Ensembl Transcript ID: ENST00000519023
RefSeq ID: NR_047475
Location (hg38): chr8:32440746-32442725
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 505 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000519023.1; NRG1-IT3-001; OTTHUMT00000376706.1; NONHSAT125938; NR_047475; NR_047475.1
Alternative gene names: ENSG00000254049.1; NRG1-IT3; OTTHUMG00000164003.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -302.6178 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NRG1-IT3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAK16-4:1
4.0 NRG1-IT3:1
4.1 NRG1-IT3:1
5.0 NRG1-IT3:1
5.1 NRG1-IT3:1
5.2 NRG1-IT3:1