Transcript: OVOL1-AS1:4

Basic information

LNCipedia transcript ID: OVOL1-AS1:4 
LNCipedia gene ID: OVOL1-AS1
RefSeq ID: NR_108085
Location (hg38): chr11:65789001-65790868
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 544 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108085; NR_108085.1
Alternative gene names: ; OVOL1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.6741 non-coding 
CPAT coding probability 9.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
OVOL1-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-770G2.3.1-1:6
4.0 OVOL1-AS1:4
4.1 OVOL1-AS1:4
5.0 OVOL1-AS1:4
5.1 OVOL1-AS1:4
5.2 OVOL1-AS1:4