Transcript: OVOL1-AS1:5

Basic information

LNCipedia transcript ID: OVOL1-AS1:5 
HGNC Gene Symbol: OVOL1-AS1    
HGNC Full Gene Name: OVOL1 antisense RNA 1
Ensembl Gene ID: ENSG00000255120
Ensembl Transcript ID: ENST00000527453
Location (hg38): chr11:65789051-65790021
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 472 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000527453.1; RP11-770G2.4-002; OTTHUMT00000390659.1; NONHSAT022210; ENST00000527453.5
Alternative gene names: ENSG00000255120.1; RP11-770G2.4; OTTHUMG00000166597.1; OVOL1-AS1; ENSG00000255120.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.6741 non-coding 
CPAT coding probability 9.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
OVOL1-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-770G2.3.1-1:2
4.0 OVOL1-AS1:5
4.1 OVOL1-AS1:5
5.0 OVOL1-AS1:5
5.1 OVOL1-AS1:5
5.2 OVOL1-AS1:5