Transcript: PART1:1
Basic information
LNCipedia transcript ID: PART1:1
LNCipedia gene ID: PART1
Location (hg38): chr5:60487713-60491265
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2316 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000515734; ENST00000515734.1; PART1-001; OTTHUMT00000367928.2; NONHSAT101636
Alternative gene names: ENSG00000152931; PART1; ENSG00000152931.6; OTTHUMG00000162213.2; DKFZP586D0823; NCRNA00206
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Webb (2015), RNA sequencing of transcriptomes in human brain regions: protein-coding and non-coding RNAs, isoforms and alleles., BMC Genomics
- Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.
- Lin (2000), PART-1: a novel human prostate-specific, androgen-regulated gene that maps to chromosome 5q12., Cancer Res.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-AC109486.1-1:1 |
| 3.1 | lnc-AC109486.1-1:1 |
| 4.0 | PART1:1 |
| 4.1 | PART1:1 |
| 5.0 | PART1:1 |
| 5.1 | PART1:1 |
| 5.2 | PART1:1 |