Transcript: PTCSC3:1
Basic information
LNCipedia transcript ID: PTCSC3:1
LNCipedia gene ID: PTCSC3
Location (hg38): chr14:36129552-36176755
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2463 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022708; NONHSAT036411
Alternative gene names: XLOC_010996; linc-RALGAPA1-4;
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| PTCSC3:1 | no | no | no | no |
Available literature
- Zheng (2016), BRAF-Activated Long Noncoding RNA Modulates Papillary Thyroid Carcinoma Cell Proliferation through Regulating Thyroid Stimulating Hormone Receptor., Cancer Res Treat
- Jendrzejewski (2015), PTCSC3 Is Involved in Papillary Thyroid Carcinoma Development by Modulating S100A4 Gene Expression., J. Clin. Endocrinol. Metab.
- Das (2014), lnCeDB: database of human long noncoding RNA acting as competing endogenous RNA., PLoS ONE
- Li (2014), Discovery of Protein-lncRNA Interactions by Integrating Large-Scale CLIP-Seq and RNA-Seq Datasets., Front Bioeng Biotechnol
- Cheng (2013), Repressing the repressor: a lincRNA as a MicroRNA sponge in embryonic stem cell self-renewal., Dev. Cell
- Hangauer (2013), Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs., PLoS Genet.
- Kapusta (2013), Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs., PLoS Genet.
- Jendrzejewski (2012), The polymorphism rs944289 predisposes to papillary thyroid carcinoma through a large intergenic noncoding RNA gene of tumor suppressor type., Proc. Natl. Acad. Sci. U.S.A.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-MBIP-2:1 |
| 3.1 | lnc-MBIP-2:1 |
| 4.0 | PTCSC3:1 |
| 4.1 | PTCSC3:1 |
| 5.0 | PTCSC3:1 |
| 5.1 | PTCSC3:1 |
| 5.2 | PTCSC3:1 |