Transcript: RUNDC3A-AS1:4

Basic information

LNCipedia transcript ID: RUNDC3A-AS1:4 
LNCipedia gene ID: RUNDC3A-AS1
RefSeq ID: NR_110802
Location (hg38): chr17:44299574-44308431
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5081 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110802; NR_110802.1
Alternative gene names: ; RUNDC3A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.0227 non-coding 
CPAT coding probability 11.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RUNDC3A-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC25A39-1:5
4.0 RUNDC3A-AS1:4
4.1 RUNDC3A-AS1:4
5.0 RUNDC3A-AS1:4
5.1 RUNDC3A-AS1:4
5.2 RUNDC3A-AS1:4