Transcript: SEPT7-AS1:6

Basic information

LNCipedia transcript ID: SEPT7-AS1:6 
LNCipedia gene ID: SEPT7-AS1
Location (hg38): chr7:35754964-35800606
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 702 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000437235.2; AC007551.3-002; OTTHUMT00000338282.2; NONHSAT120096
Alternative gene names: ENSG00000228878.2; AC007551.3; OTTHUMG00000155061.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.4842 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SEPT7-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HERPUD2-2:2
4.0 SEPT7-AS1:6
4.1 SEPT7-AS1:6
5.0 SEPT7-AS1:6
5.1 SEPT7-AS1:6
5.2 SEPT7-AS1:6