Transcript: SEPT7-AS1:7

Basic information

LNCipedia transcript ID: SEPT7-AS1:7 
HGNC Gene Symbol: SEPT7-AS1    
HGNC Full Gene Name: SEPT7 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000228878
Ensembl Transcript ID: ENST00000437235
Location (hg38): chr7:35751856-35800606
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3810 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437235.3; ENST00000437235.7
Alternative gene names: ENSG00000228878.3; AC007551.3; ENSG00000228878.7; SEPT7-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.7487 non-coding 
CPAT coding probability 11.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SEPT7-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HERPUD2-2:6
4.0 SEPT7-AS1:7
4.1 SEPT7-AS1:7
5.0 SEPT7-AS1:7
5.1 SEPT7-AS1:7
5.2 SEPT7-AS1:7