Transcript: SPATA8-AS1:1

Basic information

LNCipedia transcript ID: SPATA8-AS1:1 
LNCipedia gene ID: SPATA8-AS1
RefSeq ID: NR_102753
Location (hg38): chr15:96772005-96783337
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 496 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT050378; NR_102753; NR_102753.1
Alternative gene names: ; SPATA8-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -399.3727 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SPATA8-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC016251.1-6:3
4.0 SPATA8-AS1:1
4.1 SPATA8-AS1:1
5.0 SPATA8-AS1:1
5.1 SPATA8-AS1:1
5.2 SPATA8-AS1:1