Transcript: STK4-AS1:2

Basic information

LNCipedia transcript ID: STK4-AS1:2 
LNCipedia gene ID: STK4-AS1
Location (hg38): chr20:44963801-44966402
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2058 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00027891
Alternative gene names: XLOC_013753; linc-TOMM34;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7175 non-coding 
CPAT coding probability 26.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STK4-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TOMM34-1:1
3.1 lnc-TOMM34-1:2
4.0 STK4-AS1:2
4.1 STK4-AS1:2
5.0 STK4-AS1:2
5.1 STK4-AS1:2
5.2 STK4-AS1:2