Transcript: TM4SF1-AS1:3

Basic information

LNCipedia transcript ID: TM4SF1-AS1:3 
LNCipedia gene ID: TM4SF1-AS1
RefSeq ID: NR_109810
Location (hg38): chr3:149377778-149386583
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 750 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109810; NR_109810.1
Alternative gene names: ; TM4SF1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -318.3414 non-coding 
CPAT coding probability 3.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TM4SF1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TM4SF4-1:5
4.0 TM4SF1-AS1:3
4.1 TM4SF1-AS1:3
5.0 TM4SF1-AS1:3
5.1 TM4SF1-AS1:3
5.2 TM4SF1-AS1:3