Transcript: TMEM254-AS1:12

Basic information

LNCipedia transcript ID: TMEM254-AS1:12 
LNCipedia gene ID: TMEM254-AS1
Location (hg38): chr10:80046240-80059542
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6757 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1538:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.8308 non-coding 
CPAT coding probability 13.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM254-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 TMEM254-AS1:12
4.1 TMEM254-AS1:12
5.0 TMEM254-AS1:12
5.1 TMEM254-AS1:12
5.2 TMEM254-AS1:12