Transcript: TMEM254-AS1:2

Basic information

LNCipedia transcript ID: TMEM254-AS1:2 
LNCipedia gene ID: TMEM254-AS1
RefSeq ID: NR_027429
Location (hg38): chr10:80046233-80079193
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3959 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT015216; NR_027429; NR_027429.1
Alternative gene names: ; TMEM254-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.1968 non-coding 
CPAT coding probability 25.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM254-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFTPD-1:9
4.0 TMEM254-AS1:2
4.1 TMEM254-AS1:2
5.0 TMEM254-AS1:2
5.1 TMEM254-AS1:2
5.2 TMEM254-AS1:2