Transcript: TMEM254-AS1:8

Basic information

LNCipedia transcript ID: TMEM254-AS1:8 
HGNC Gene Symbol: TMEM254-AS1    
HGNC Full Gene Name: TMEM254 antisense RNA 1
Ensembl Gene ID: ENSG00000230091
Ensembl Transcript ID: ENST00000432070
Location (hg38): chr10:80047722-80078912
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2189 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000432070.2
Alternative gene names: ENSG00000230091.2; TMEM254-AS1; ENSG00000230091.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.1968 non-coding 
CPAT coding probability 27.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM254-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFTPD-1:10
4.0 TMEM254-AS1:8
4.1 TMEM254-AS1:8
5.0 TMEM254-AS1:8
5.1 TMEM254-AS1:8
5.2 TMEM254-AS1:8