Transcript: TRERNA1:2
Basic information
LNCipedia transcript ID: TRERNA1:2
HGNC Gene Symbol: TRERNA1
HGNC Full Gene Name:
translation regulatory long non-coding RNA 1
Ensembl Gene ID:
ENSG00000231265
Ensembl Transcript ID:
ENST00000431460
Location (hg38): chr20:50040716-50041504
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00028062; ENST00000431460; ENST00000431460.1; RP4-710H13.2-001; OTTHUMT00000079667.1
Alternative gene names: XLOC_013787; linc-SPATA2-1; ENSG00000231265; RP4-710H13.2; ENSG00000231265.1; OTTHUMG00000032711.1; TRERNA1; ncRNA-a7; treRNA
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| TRERNA1:2 | no | no | no | no |
Available literature
- Wang (2015), miR-190a inhibits epithelial-mesenchymal transition of hepatoma cells via targeting the long non-coding RNA treRNA., FEBS Lett.
- Gumireddy (2013), Identification of a long non-coding RNA-associated RNP complex regulating metastasis at the translational step., EMBO J.
- Ørom (2010), Long noncoding RNAs with enhancer-like function in human cells., Cell
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-TMEM189-UBE2V1-1:1 |
| 3.1 | lnc-TMEM189-UBE2V1-1:1 |
| 4.0 | TRERNA1:2 |
| 4.1 | TRERNA1:2 |
| 5.0 | TRERNA1:2 |
| 5.1 | TRERNA1:2 |
| 5.2 | TRERNA1:2 |