Transcript: TRG-AS1:3

Basic information

LNCipedia transcript ID: TRG-AS1:3 
HGNC Gene Symbol: TRG-AS1    
HGNC Full Gene Name: T cell receptor gamma locus antisense RNA 1
RefSeq ID: NR_040085
Location (hg38): chr7:38341577-38378637
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3516 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT120179; NR_040085; NR_040085.1
Alternative gene names: ; TRG-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.188 non-coding 
CPAT coding probability 4.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRG-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STARD3NL-1:4
4.0 TRG-AS1:3
4.1 TRG-AS1:3
5.0 TRG-AS1:3
5.1 TRG-AS1:3
5.2 TRG-AS1:3