Transcript: TRHDE-AS1:15

Basic information

LNCipedia transcript ID: TRHDE-AS1:15 
LNCipedia gene ID: TRHDE-AS1
Location (hg38): chr12:72261547-72274212
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2256 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236333.3|HBMT00000336349.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.4636 non-coding 
CPAT coding probability 31.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRHDE-AS1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TRHDE-AS1:15
5.0 TRHDE-AS1:15
5.1 TRHDE-AS1:15
5.2 TRHDE-AS1:15