Transcript: TRHDE-AS1:18

Basic information

LNCipedia transcript ID: TRHDE-AS1:18 
LNCipedia gene ID: TRHDE-AS1
Location (hg38): chr12:72256404-72273507
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7532 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236333.3|ENCT00000103823.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -71.0279 non-coding 
CPAT coding probability 98.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TRHDE-AS1:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TRHDE-AS1:18
5.0 TRHDE-AS1:18
5.1 TRHDE-AS1:18
5.2 TRHDE-AS1:18