Transcript: TRHDE-AS1:2

Basic information

LNCipedia transcript ID: TRHDE-AS1:2 
HGNC Gene Symbol: TRHDE-AS1    
HGNC Full Gene Name: TRHDE antisense RNA 1
Ensembl Gene ID: ENSG00000236333
Ensembl Transcript ID: ENST00000426250
Location (hg38): chr12:72262547-72274907
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3684 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000426250.3
Alternative gene names: ENSG00000236333.3; TRHDE-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.4636 non-coding 
CPAT coding probability 41.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TRHDE-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFC3H1-6:9
4.0 TRHDE-AS1:2
4.1 TRHDE-AS1:2
5.0 TRHDE-AS1:2
5.1 TRHDE-AS1:2
5.2 TRHDE-AS1:2