Transcript: TTTY13:2

Basic information

LNCipedia transcript ID: TTTY13:2 
HGNC Gene Symbol: TTTY13    
HGNC Full Gene Name: testis-specific transcript, Y-linked 13
Ensembl Gene ID: ENSG00000184991
Ensembl Transcript ID: ENST00000330337
Location (hg38): chrY:21583600-21594666
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 659 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000330337; ENST00000330337.2; TTTY13-001; OTTHUMT00000101923.1; NONHSAT139656; NR_001537
Alternative gene names: ENSG00000184991; TTTY13; ENSG00000184991.2; OTTHUMG00000043583.1; TTY13; NCRNA00136


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.0355 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CYorf17-1:2
3.1 lnc-CYorf17-1:1
4.0 TTTY13:2
4.1 TTTY13:2
5.0 TTTY13:2
5.1 TTTY13:2
5.2 TTTY13:2