Transcript: TTTY19:1

Basic information

LNCipedia transcript ID: TTTY19:1 
HGNC Gene Symbol: TTTY19    
HGNC Full Gene Name: testis-specific transcript, Y-linked 19
Ensembl Gene ID: ENSG00000232419
Ensembl Transcript ID: ENST00000453955
RefSeq ID: NR_001549
Location (hg38): chrY:8704472-8705283
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 269 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00017574; ENST00000453955; ENST00000453955.1; TTTY19-001; OTTHUMT00000098863.1; NONHSAT139394; NR_001549; NR_001549.1
Alternative gene names: XLOC_008288; linc-TSPY4-1; ENSG00000232419; TTTY19; ENSG00000232419.1; OTTHUMG00000041268.1; NCRNA00144


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.3644 non-coding 
CPAT coding probability 3.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPY4-1:1
3.1 lnc-TSPY4-1:1
4.0 TTTY19:1
4.1 TTTY19:1
5.0 TTTY19:1
5.1 TTTY19:1
5.2 TTTY19:1