Transcript: TTTY1:1

Basic information

LNCipedia transcript ID: TTTY1:1 
LNCipedia gene ID: TTTY1
RefSeq ID: NR_001538
Location (hg38): chrY:9753156-9774319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 940 bp
Exons: 5
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00017588; NONHSAT139429; NR_003589; NR_001538.2
Alternative gene names: XLOC_008321; linc-AMELY-8; TTY1; NCRNA00033; LINC00033; TTTY1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC006156.1-3:1
3.1 lnc-AC006156.1-4:1
4.0 TTTY1:1
4.1 TTTY1:1
5.0 TTTY1:1
5.1 TTTY1:1
5.2 TTTY1:1