Transcript: TTTY1:2

Basic information

LNCipedia transcript ID: TTTY1:2 
HGNC Gene Symbol: TTTY1    
HGNC Full Gene Name: testis-specific transcript, Y-linked 1
Ensembl Gene ID: ENSG00000129845
Ensembl Transcript ID: ENST00000250805
Location (hg38): chrY:9753156-9774289
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 910 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000250805; ENST00000250805.5; TTTY1-001; OTTHUMT00000106563.1; NR_001538
Alternative gene names: ENSG00000129845; TTTY1; ENSG00000129845.5; OTTHUMG00000046226.1; TTY1; NCRNA00033; LINC00033


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 31.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC006156.1-3:2
3.1 lnc-AC006156.1-4:2
4.0 TTTY1:2
4.1 TTTY1:2
5.0 TTTY1:2
5.1 TTTY1:2
5.2 TTTY1:2