Transcript: USP27X-AS1:3

Basic information

LNCipedia transcript ID: USP27X-AS1:3 
HGNC Gene Symbol: USP27X-AS1    
HGNC Full Gene Name: USP27X antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000234390
Ensembl Transcript ID: ENST00000437322
Location (hg38): chrX:49876724-49879241
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2175 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437322.2
Alternative gene names: ENSG00000234390.4; USP27X-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.7744 non-coding 
CPAT coding probability 43.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
USP27X-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAGE1-1:3
4.0 USP27X-AS1:3
4.1 USP27X-AS1:3
5.0 USP27X-AS1:3
5.1 USP27X-AS1:3
5.2 USP27X-AS1:3