Transcript: USP3-AS1:7

Basic information

LNCipedia transcript ID: USP3-AS1:7 
LNCipedia gene ID: USP3-AS1
Location (hg38): chr15:63587713-63600760
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1781 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499437
Alternative gene names: ENSG00000247530;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 62.0826 coding 
CPAT coding probability 8.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
USP3-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HERC1-1:2
3.1 lnc-HERC1-1:4
4.0 USP3-AS1:7
4.1 USP3-AS1:7
5.0 USP3-AS1:7
5.1 USP3-AS1:7
5.2 USP3-AS1:7