Transcript: VPS13A-AS1:4

Basic information

LNCipedia transcript ID: VPS13A-AS1:4 
HGNC Gene Symbol: VPS13A-AS1    
HGNC Full Gene Name: VPS13A antisense RNA 1
Ensembl Gene ID: ENSG00000232998
Ensembl Transcript ID: ENST00000644612
Location (hg38): chr9:77176760-77178180
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 701 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000644612.1
Alternative gene names: ENSG00000232998.2; VPS13A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.5825 non-coding 
CPAT coding probability 5.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VPS13A-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 VPS13A-AS1:4
5.1 VPS13A-AS1:4
5.2 VPS13A-AS1:4