Transcript: WNT5A-AS1:1

Basic information

LNCipedia transcript ID: WNT5A-AS1:1 
HGNC Gene Symbol: WNT5A-AS1    
HGNC Full Gene Name: WNT5A antisense RNA 1
Ensembl Gene ID: ENSG00000244586
Ensembl Transcript ID: ENST00000469484
Location (hg38): chr3:55487699-55488308
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 500 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000469484.1; WNT5A-AS1-001; OTTHUMT00000350841.1; NONHSAT090031
Alternative gene names: ENSG00000244586.1; WNT5A-AS1; OTTHUMG00000158382.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.4224 non-coding 
CPAT coding probability 37.70% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
WNT5A-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CACNA2D3-3:1
4.0 WNT5A-AS1:1
4.1 WNT5A-AS1:1
5.0 WNT5A-AS1:1
5.1 WNT5A-AS1:1
5.2 WNT5A-AS1:1