Transcript: YTHDF3-AS1:1

Basic information

LNCipedia transcript ID: YTHDF3-AS1:1 
HGNC Gene Symbol: YTHDF3-AS1    
HGNC Full Gene Name: YTHDF3 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000270673
Ensembl Transcript ID: ENST00000603538
RefSeq ID: NR_102684
Location (hg38): chr8:63167725-63168442
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 718 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT126920; NR_102684; ENST00000603538.1; NR_102684.1
Alternative gene names: ENSG00000270673.1; YTHDF3-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -251.2286 non-coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
YTHDF3-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTPA-7:1
4.0 YTHDF3-AS1:1
4.1 YTHDF3-AS1:1
5.0 YTHDF3-AS1:1
5.1 YTHDF3-AS1:1
5.2 YTHDF3-AS1:1