Transcript: lnc-ACKR3-7:1

Basic information

LNCipedia transcript ID: lnc-ACKR3-7:1 
LNCipedia gene ID: lnc-ACKR3-7
Location (hg38): chr2:235998676-235999847
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1034 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT077581
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.0978 non-coding 
CPAT coding probability 28.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACKR3-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC079135.1.1-7:1
4.0 lnc-AC079135.1.1-7:1
4.1 lnc-AC079135.1.1-7:1
5.0 lnc-AC079135.1.1-7:1
5.1 lnc-ACKR3-10:1
5.2 lnc-ACKR3-7:1