Transcript: lnc-HTR5A-5:2

Basic information

LNCipedia transcript ID: lnc-HTR5A-5:2 
LNCipedia gene ID: lnc-HTR5A-5
Location (hg38): chr7:154835080-154836122
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 367 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT124322
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.8425 non-coding 
CPAT coding probability 3.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HTR5A-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC093726.6.1-5:1
4.0 lnc-AC093726.6.1-5:1
4.1 lnc-AC093726.6.1-5:1
5.0 lnc-AC093726.6.1-5:1
5.1 lnc-HTR5A-5:1
5.2 lnc-HTR5A-5:2

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