Transcript: LINC02502:10

Basic information

LNCipedia transcript ID: LINC02502:10 
HGNC Gene Symbol: LINC02502    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2502
Ensembl Gene ID: ENSG00000250392
Ensembl Transcript ID: ENST00000505122
RefSeq ID: NR_121639
Location (hg38): chr4:119939540-119964293
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 642 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000505122.2; NR_121639; NR_121639.1
Alternative gene names: ENSG00000250392.2; RP11-700N1.1; LINC02502; LOC100996694


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.0531 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02502:10 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC110373.1-5:4
4.0 lnc-AC110373.1-5:4
4.1 lnc-AC110373.1-5:4
5.0 lnc-AC110373.1-5:4
5.1 LINC02502:5
5.2 LINC02502:10